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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
07/10/2014 |
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Actualizado : |
09/10/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
VITEZICA, Z.G.; AGUILAR, I.; MISZTAL, I.; LEGARRA, A. |
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Afiliación : |
IGNACIO AGUILAR GARCIA, Instituto Nacional de Investigación Agropecuaria (INIA), Uruguay. |
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Título : |
Bias in genomic predictions for populations under selection. |
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Fecha de publicación : |
2011 |
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Fuente / Imprenta : |
Genetics Research, 2011, v.93 no.5, p.357-366. |
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ISSN : |
0016-6723 |
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DOI : |
10.1017/S001667231100022X |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 27 January 2011 / Revised 27 March 2011 / Published online 18 July 2011. |
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Contenido : |
ABSTRACT.
Prediction of genetic merit or disease risk using genetic marker information is becoming a common practice for selection of livestock and plant species. For the successful application of genome-wide marker-assisted selection (GWMAS), genomic predictions should be accurate and unbiased. The effect of selection on bias and accuracy of genomic predictions was studied in two simulated animal populations under weak or strong selection and with several heritabilities. Prediction of genetic values was by best-linear unbiased prediction (BLUP) using data either from relatives summarized in pseudodata for genotyped individuals (multiple-step method) or using all available data jointly (single-step method). The single-step method combined genomic- and pedigree-based relationship matrices. Predictions by the multiple-step method were biased. Predictions by a single-step method were less biased and more accurate but under strong selection were less accurate. When genomic relationships were shifted by a constant, the single-step method was unbiased and the most accurate. The value of that constant, which adjusts for non-random selection of genotyped individuals, can be derived analytically.
© 2011 Cambridge University Press. |
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Thesagro : |
DETECCIÓN DE QTLS; MARCADORES GENÉTICOS; MEJORAMIENTO GENÉTICO ANIMAL. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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Marc : |
LEADER 01990naa a2200229 a 4500
001 1050957
005 2019-10-09
008 2011 bl uuuu u00u1 u #d
022 $a0016-6723
024 7 $a10.1017/S001667231100022X$2DOI
100 1 $aVITEZICA, Z.G.
245 $aBias in genomic predictions for populations under selection.$h[electronic resource]
260 $c2011
500 $aArticle history: Received 27 January 2011 / Revised 27 March 2011 / Published online 18 July 2011.
520 $aABSTRACT. Prediction of genetic merit or disease risk using genetic marker information is becoming a common practice for selection of livestock and plant species. For the successful application of genome-wide marker-assisted selection (GWMAS), genomic predictions should be accurate and unbiased. The effect of selection on bias and accuracy of genomic predictions was studied in two simulated animal populations under weak or strong selection and with several heritabilities. Prediction of genetic values was by best-linear unbiased prediction (BLUP) using data either from relatives summarized in pseudodata for genotyped individuals (multiple-step method) or using all available data jointly (single-step method). The single-step method combined genomic- and pedigree-based relationship matrices. Predictions by the multiple-step method were biased. Predictions by a single-step method were less biased and more accurate but under strong selection were less accurate. When genomic relationships were shifted by a constant, the single-step method was unbiased and the most accurate. The value of that constant, which adjusts for non-random selection of genotyped individuals, can be derived analytically. © 2011 Cambridge University Press.
650 $aDETECCIÓN DE QTLS
650 $aMARCADORES GENÉTICOS
650 $aMEJORAMIENTO GENÉTICO ANIMAL
700 1 $aAGUILAR, I.
700 1 $aMISZTAL, I.
700 1 $aLEGARRA, A.
773 $tGenetics Research, 2011$gv.93 no.5, p.357-366.
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| Registros recuperados : 4 | |
| 1. |  | BIRU, F.N; ISLAM, T.; CIBILS-STEWART, X.; CAZZONELLI, CH.I.; ELBAUM, R.; JOHNSON, S.N. Anti-herbivore silicon defences in a model grass are greatest under Miocene levels of atmospheric CO2. Global Change Biology, Volume 27, Issue 12, Pages 2959-2969, June 2021. Doi: https://doi.org/10.1111/gcb.15619 Article history: Received: 8 February 2021/Accepted: 12 March 2021./ First published: 27 March 2021: Email: f.biru@westernsydney.edu.au.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA La Estanzuela. |
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| 2. | | JOHNSON, S.N; CIBILS-STEWART, X.; WATERMAN, J.M.; BIRU, F.N.; ROWE, R.C.; HARTLEY, S.E. Elevated atmospheric CO 2 changes defence allocation in wheat but herbivore resistance persists. Proceedings of the Royal Society B: Biological Sciences, 2022, Volume 289, Issue 1969, Article number 20212536. doi: https://doi.org/10.6084/m9.figshare.c.5833004 Article history: Received: 23 November 2021/Accepted: 14 January 2022. Electronic supplementary material is available online at https://doi.org/10.6084/m9.figshare.c.5833004.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA La Estanzuela. |
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| 3. | | JOHNSON, S.N; BARTON, C.V.M.; BIRU, F.N.; ISLAM , T.; MACE, W.J.; ROWE, R.C.; CIBILS-STEWART, X. Elevated atmospheric CO2 suppresses silicon accumulation and exacerbates endophyte reductions in plant phosphorus. [Dataset]. DRYAD Dataset, 2023. https://doi.org/10.5061/dryad.6m905qg4p Article history: Publication date 12 April 12 2023. -- Correspondence author: Johnson, S.N.; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia; email:scott.johnson@westernsydney.edu.au --...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 4. | | JOHNSON, S.N.; BARTON, C.V.M.; BIRU, F.N.; ISLAM , T.; MACE, W.J.; ROWE, R.C.; CIBILS-STEWART, X. Elevated atmospheric CO2 suppresses silicon accumulation and exacerbates endophyte reductions in plant phosphorus. Functional Ecology, 2023. https://doi.org/10.1111/1365-2435.14342 -- [Article in Press] Article history: Accepted 28 March 2023, Received 15 January 2023, First published 27 April 2023. -- Correspondence author:Johnson, S.N.; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia;...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| Registros recuperados : 4 | |
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