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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
11/08/2016 |
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Actualizado : |
15/10/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
LINLIN, L.; GIANNITTI, F.; LOW, J.; KEYES, C.; ULLMANN, L.S.; DENG, X.; ALEMAN, M.; PESAVENTO, P.A.; PUSTERLA, N.; DELWART, E. |
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Afiliación : |
LIN LINLIN, Blood Systems Research Institute, San Francisco, CA, United States; FEDERICO GIANNITTI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Universidad de California Davis (UCD);; JASON LOW, University of California, Los Angeles, CA, USA; CASEY KEYES, University of San Francisco, San Francisco, CA, USA; LEILA S. ULLMANN, UNESP Sao Paulo State University, Sao Paulo, Brazil; XUTAO DENG, Blood Systems Research Institute, San Francisco, CA, United States; University of California, San Francisco, CA, USA; MONICA ALEMAN, University of 15 California, Davis, CA, USA; PATRICIA A. PESAVENTO, University of California, Davis, CA, USA; NICOLA PUSTERLA, University of California, Davis, CA, USA; ERIC DELWALRT, Blood Systems Research Institute, San Francisco, CA, USA; University of California, Davis, CA, USA. |
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Título : |
Exploring the virome of diseased horses. |
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Fecha de publicación : |
2015 |
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Fuente / Imprenta : |
Journal of General Virology, 2015, v. 96, no. 1, p. 2721-2733. |
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DOI : |
10.1099/vir.0.000199 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 20 march 2015 / Accepted: 24 may 2015/ 2015 Published Online: 01 september 2015. |
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Contenido : |
ABSTRACT.
Metagenomics was used to characterize viral genomes in clinical specimens of horses with various organ-specific diseases of unknown aetiology. A novel parvovirus as well as a previously described hepacivirus closely related to human hepatitis C virus and equid herpesvirus 2 were identified in the cerebrospinal fluid of horses with neurological signs. Four co-infecting picobirnaviruses, including an unusual genome with fused RNA segments, and a divergent anellovirus were found in the plasma of two febrile horses. A novel cyclovirus genome was characterized from the nasal secretion of another febrile animal. Lastly, a small circular DNA genome with a Rep gene, from a virus we called kirkovirus, was identified in the liver and spleen of a horse with fatal idiopathic hepatopathy. This study expands the number of viruses found in horses, and characterizes their genomes to assist future epidemiological studies of their transmission and potential association with various equine diseases.
© 2015 The Authors. |
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Palabras claves : |
ANIMALS; GENOME; HORSES; HORSES DISEASES; HUMANS; METAGENOMICS; MOLECULAR SEQUENCE DATA; PHYLOGEHY; VIRAL; VIRUS DISEASES. |
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Thesagro : |
ANIMALES; CABALLOS; ENFERMEDADES DE LOS ANIMALES. |
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Asunto categoría : |
-- |
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Marc : |
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001 1055236
005 2019-10-15
008 2015 bl uuuu u00u1 u #d
024 7 $a10.1099/vir.0.000199$2DOI
100 1 $aLINLIN, L.
245 $aExploring the virome of diseased horses.$h[electronic resource]
260 $c2015
500 $aArticle history: Received: 20 march 2015 / Accepted: 24 may 2015/ 2015 Published Online: 01 september 2015.
520 $aABSTRACT. Metagenomics was used to characterize viral genomes in clinical specimens of horses with various organ-specific diseases of unknown aetiology. A novel parvovirus as well as a previously described hepacivirus closely related to human hepatitis C virus and equid herpesvirus 2 were identified in the cerebrospinal fluid of horses with neurological signs. Four co-infecting picobirnaviruses, including an unusual genome with fused RNA segments, and a divergent anellovirus were found in the plasma of two febrile horses. A novel cyclovirus genome was characterized from the nasal secretion of another febrile animal. Lastly, a small circular DNA genome with a Rep gene, from a virus we called kirkovirus, was identified in the liver and spleen of a horse with fatal idiopathic hepatopathy. This study expands the number of viruses found in horses, and characterizes their genomes to assist future epidemiological studies of their transmission and potential association with various equine diseases. © 2015 The Authors.
650 $aANIMALES
650 $aCABALLOS
650 $aENFERMEDADES DE LOS ANIMALES
653 $aANIMALS
653 $aGENOME
653 $aHORSES
653 $aHORSES DISEASES
653 $aHUMANS
653 $aMETAGENOMICS
653 $aMOLECULAR SEQUENCE DATA
653 $aPHYLOGEHY
653 $aVIRAL
653 $aVIRUS DISEASES
700 1 $aGIANNITTI, F.
700 1 $aLOW, J.
700 1 $aKEYES, C.
700 1 $aULLMANN, L.S.
700 1 $aDENG, X.
700 1 $aALEMAN, M.
700 1 $aPESAVENTO, P.A.
700 1 $aPUSTERLA, N.
700 1 $aDELWART, E.
773 $tJournal of General Virology, 2015$gv. 96, no. 1, p. 2721-2733.
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INIA Las Brujas (LB) |
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| Registros recuperados : 41 | |
| 1. |  | BERMANN, M.; AGUILAR, I.; LOURENCO, D.; MISZTAL, I. Approximation of reliabilities for random-regression single-step genomic best linear unbiased predictor. [2711 - abstract]. Breeding and Genetics 3: Advances in Methods for Genetic Improvement. In: American Dairy Science Association (ASDA), Annual Meeting, June 25-28, 2023, Ottawa, Ontario, Canadá. Journal of Dairy Science, 2023, Volume 106, Supplement 1, Abstracts, p.188.| Tipo: Abstracts/Resúmenes |
| Biblioteca(s): INIA Las Brujas. |
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| 2. | | BERMANN, M.; MISZTAL, I.; LOURENCO, D.; AGUILAR, I.; LEGARRA, A. Definition of reliabilities for models with metafounders. [289] Part 17 - Challenges - improving genomic prediction. In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_289 1217-1220. Article history: Published online: February 9, 2023. -- Corresponding author: A. Legarra, email: andres.legarra@inrae.fr -- Acknowledgment: This work received financing from European Unions' Horizon 2020 Research & Innovation Programme,...| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 3. | | BERMANN, M.; AGUILAR, I.; LOURENCO , D.; MISZTAL, I.; LEGARRA, A. Reliabilities of estimated breeding values in models with metafounders. Research article. Genetics, Selection, Evolution : GSE, 2023, volume55, issue 1, article 6. OPEN ACCESS. doi: https://doi.org/10.1186/s12711-023-00778-2 Article history: Received 29 June 2022; Accepted 04 January 2023; Published 23 January 2023. -- Corresponding author: Matias Bermann, Department of Animal and Dairy Science, University of Georgia, Athens, GA, USA, email: mbermann@uga.edu...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 4. | | ZHANG, X.; LOURENCO, D.; MISZTAL, I.; AGUILAR, I.; LEGARRA, A. Weighted single-step genomic BLUP: an iterative approach for accurate calculation of GEBV and GWAS. Volume Methods and Tools: Statistical and genomic tools for mapping QTL and genes (Posters), 681. In: Proceedings of the World Congress on Genetics Applied to Livestock Production, 10., Vancouver, BC, Canada, August 17-22, 2014. p.681.| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 5. | | ZHANG, X.; LOURENCO, D.; AGUILAR, I.; LEGARRA, A.; MISZTAL, I. Weighting strategies for single-step genomic BLUP: An iterative approach for accurate calculation of GEBV and GWAS. Frontiers in Genetics, 19 August 2016, Volume 7, Issue AUG, Article number 151. OPEN ACCESS Article history: Received 15 May 2016 // Accepted 04 August 2016 // Published 19 August 2016.
Specialty section:
This article was submitted to Statistical Genetics and Methodology, a section of the journal Frontiers in Genetics.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 2 |
| Biblioteca(s): INIA Las Brujas. |
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| 6. | | GARCÍA, A.; AGUILAR, I.; LEGARRA, A.; TSURUTA, S.; MISZTAL, I.; LOURENCO, D. Correction: Theoretical accuracy for indirect predictions based on SNP effects from single-step GBLUP (Genetics, selection, evolution : GSE (2022) 54:1 (66)). Genetics, Selection, Evolution : GSE, 2023, Volume 55, Issue 1, Pages 26. OPEN ACCESS. https://doi.org/10.1186/s12711-023-00799-x Article history: Published online 17 April 2023. -- Document: Erratum - Gold Open Access. -- The original article can be found online at https://doi.org/10.1186/s12711-022-00752-4| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 7. | | LOURENCO, D.; BERMANN, M.; TABET, J.M.; AGUILAR, I.; LEGARRA, A.; TSURUTA, S.; MISZTAL, I. Approximating reliabilities of indirect predictions based on SNP effects from large single-step genomic best linear unbiased prediction evaluations. [1520 - abstract]. Breeding and Genetics 3. In: American Dairy Science Association (ASDA), Annual Meeting, June 16-19, 2024, West Palm Beach, Florida. Journal of Dairy Science, 2024, Volume 107, Supplement 1, Abstracts, p.131-132.| Tipo: Abstracts/Resúmenes |
| Biblioteca(s): INIA Las Brujas. |
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| 8. | | BERMANN, M.; AGUILAR, I.; ALVAREZ MUNERA, A.; BAUER, J.; SPLÍCHAL, J.; LOURENCO, D.; MISZTAL, I. Approximation of reliabilities for random-regression single-step genomic best linear unbiased predictor models. Genetics Research Technical Note. JDS Communications, November 2024, Volume 5, Issue 6, pp. 582-586. https://doi.org/10.3168/jdsc.2023-0513 -- OPEN ACCESS. Article history: Received 31 October 2023, Accepted 7 April 2024, Available online 10 May 2024, Version of Record 20 November 2024. -- Corresponding: Bermann, M.; Department of Animal and Dairy Science, University of Georgia, Athens, GA,...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 9. | | LOURENCO, D; MISZTAL, I.; TSURUTA, S.; AGUILAR, I.; LAWLOR, T. J.; WELLER, J. I. Are evaluations on young genotyped dairy bulls benefiting from the past generations? [conference paper]. Volume Species Breeding: Dairy cattle, 297. In: Proceedings of the World Congress on Genetics Applied to Livestock Production, 10., Vancouver, BC, Canada, August 17-22, 2014. p.297.| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 10. | | GARCÍA, A.; AGUILAR, I.; LEGARRA, A.; MILLER, S.; TSURUTA, S.; MISZTAL, I.; LOURENCO, D. Accuracy of indirect predictions for large datasets based on prediction error covariance of SNP effects from single-step GBLUP. [abstract 22]. Issue Section: Animal Breeding and Genetics. Journal of Animal Science, 2020, Volume 98, Issue Supplement 4, Pages 6-7. doi: https://doi.org/10.1093/jas/skaa278.012 Article history: 30 November 2020.
ASAS Annual 2020 Meeting Abstracts.| Tipo: Abstracts/Resúmenes |
| Biblioteca(s): INIA Las Brujas. |
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| 11. | | FRAGOMENI, B.O.; MISZTAL, I.; LOURENCO, D.L.; AGUILAR, I.; OKIMOTO, R.; MUIR, W.M. Changes in variance explained by top SNP windows over generations for three traits in broiler chicken Frontiers in Genetics, 2014, v.5, no.Oct., Article number 332. OPEN ACCESS. Article history: Published 01 October 2014.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : B - 2 |
| Biblioteca(s): INIA Las Brujas. |
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| 12. | | AGUILAR, I.; TSURUTA, S.; MASUDA, Y.; LOURENCO, D.A.L.; LEGARRA, A.; MISZTAL, I. BLUPF90 suite of programs for animal breeding with focus on genomics. Volume Methods and Tools - Software, p. 751. In: Proceedings of the World Congress on Genetics Applied to Livestock Production, 11., Aotea Centre Auckland, New Zealand: WCGALP, ICAR, 11-16 feb 2018. 6 p.| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 13. | | MISZTAL, I.; AGUILAR, I.; LOURENCO, D.; MA, L.; STEIBEL, J.P. Emerging issues in genomic selection. Animal Genetics and Genomics. Journal of Animal Science, June 2021, Volume 99, Issue 61, skab092. OPEN ACCESS. Doi: https://doi.org/10.1093/jas/skab092 Article history: Received 23 January 2021; Accepted 26 March 2021; Advance Access publication March 27, 2021.
This is an Open Access article distributed under the terms of the Creative Commons Attribution License...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 14. | | LOURENÇO, D. A. L.; MISZTAL, I.; TSURUTA, S.; FRAGOMENI, B.; AGUILAR, I.; MASUDA, Y.; MOSER, D. Direct and indirect genomic evaluations in beef cattle. Interbull Bulletin, 2015, v. 49, p.80 - 84.| Tipo: Artículos Indexados |
| Biblioteca(s): INIA Las Brujas. |
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| 15. | | AGUILAR, I.; LEGARRA, A.; CARDOSO, F.; MASUDA, Y.; LOURENCO, D.; MISZTAL, I. Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle. (Short Communication) Genetics Selection Evolution, 20 June 2019, v. 51, Issue 1, Article number 28. OPEN ACCESS. Article history: Received: 3 January 2019 // Accepted: 27 May 2019 // Published Online: 20 June 2019.
Funding text: This study was partially funded by the American Angus Association (St. Joseph, MO) and by Agriculture and Food Research...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 16. | | ÁLVAREZ MUNERA, A.; BERMANN, M.; AGUILAR, I.; BAUER, J.; SPLÍCHAL, J.; MISZTAL, I.; LOURENCO, D. Efficient implementation of random regression models for dairy cattle genomic evaluations. [1141 - abstract]. Breeding and Genetics 1. In: American Dairy Science Association (ASDA), Annual Meeting, June 16-19, 2024, West Palm Beach, Florida. Journal of Dairy Science, 2024, Volume 107, Supplement 1, Abstracts, p.18.| Tipo: Abstracts/Resúmenes |
| Biblioteca(s): INIA Las Brujas. |
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| 17. | | BERMANN, M.; ALVAREZ-MUNERA, A.; LEGARRA, A.; AGUILAR, I.; MISZTAL, I.; LOURENCO, D. Monte Carlo approximation of the logarithm of the determinant of large matrices with applications for linear mixed models in quantitative genetics. Research article. Genetics, Selection, Evolution (GSE), 2025, Volume 57, Article 44. https://doi.org/10.1186/s12711-025-00991-1 -- OPEN ACCESS. Article history: Received 12 December 2024, Accepted 30 July 2025, Published 06 August 2025. -- Correspondence: Matias Bermann, email: mbermann@uga.edu -- Funding: This study was funded by Agriculture and Food Research Initiative...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 18. | | MISZTAL, I.; LOURENCO, D.; TSURUTA, S.; AGUILAR, I.; MASUDA, Y.; BERMANN, M.; CESARANI, A.; LEGARRA, A. How ssGBLUP became suitable for national dairy cattle evaluations. [668]. Part 37 - Bovine dairy - genetic evaluation methods. In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_668 2757-2760. Article history: Published online: February 9, 2023 -- Corresponding author: I. Misztal, email: ignacy@uga.edu| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 19. | | LOURENCO, D.; TSURUTA, S.; AGUILAR, I.; MASUDA, Y.; BERMANN, M.; LEGARRA, A.; MISZTAL, I. Recent updates in the BLUPF90 software suite. [366]. Part 19 - Methods and tools: software and computing strategies. In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_366 1530-1533. Article history: Published online: February 9, 2023. -- Corresponding author: D. Lourenco, email: danilino@uga.edu| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 20. | | LOURENCO, D.A.L.; MISZTAL, I.; WANG, H.; AGUILAR, I.; TSURUTA, S.; BERTRAND, J.K. Prediction accuracy for a simulated maternally affected trait of beef cattle using different genomic evaluation models. Journal of Animal Science, 2013, v.91, no.9, p.4090-4098. Article history: Published online July 26, 2013.
This study was partially funded by the American Angus Association (St. Joseph, MO) and the USDA Agriculture and Food Research Initiative (Grant no. 2009-65205-05665 from the USDA National...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 2 |
| Biblioteca(s): INIA Las Brujas. |
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| Registros recuperados : 41 | |
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